Index A | B | C | D | E | F | G | H | I | L | M | N | O | P | Q | R | S | T | U | V | W A add_config() (pipeline.utils.commonutils.config.PipelineConfig method) add_lhcb_text() (pipeline.Embedding.embedding_validation.EmbeddingDistanceMaxExplorer method) (pipeline.GNN.gnn_validation.TripletGNNScoreCutExplorer method) (pipeline.utils.modelutils.exploration.ParamExplorer method) add_predefined_arguments() (in module pipeline.utils.scriptutils.parser) add_text() (in module pipeline.utils.plotutils.plotools) append_true_pairs() (pipeline.Embedding.embedding_base.EmbeddingBase method) apply_custom_processing() (in module pipeline.Preprocessing.preprocessing) apply_mask() (in module pipeline.Preprocessing.process_custom) apply_particle_requirement() (pipeline.Embedding.embedding_base.EmbeddingLazyDataSet method) array_to_tensor() (in module pipeline.utils.tools.tarray) at_least_1_hit_on_scifi() (in module pipeline.Preprocessing.process_custom) at_least_7_planes() (in module pipeline.Preprocessing.process_custom) B batch_from_edges_to_tracks() (in module pipeline.TrackBuilding.builder) batch_from_triplets_to_tracks() (in module pipeline.TrackBuilding.builder) build_edges() (pipeline.Embedding.embedding_base.EmbeddingBase method) build_edges_exatrkx() (in module pipeline.utils.graphutils.knn) build_edges_faiss() (in module pipeline.utils.graphutils.knn) build_edges_plane_by_plane() (in module pipeline.utils.graphutils.knn) build_event() (in module pipeline.Processing.processing) build_features() (pipeline.utils.modelutils.build.BuilderBase method) build_tracks_from_edges() (in module pipeline.TrackBuilding.edges2tracks) build_tracks_from_triplets_1cc() (in module pipeline.TrackBuilding.triplets2tracks) build_tracks_from_triplets_2cc() (in module pipeline.TrackBuilding.triplets2tracks) build_weights() (pipeline.utils.modelutils.build.BuilderBase method) BuilderBase (class in pipeline.utils.modelutils.build) C cast_boolean_columns() (in module pipeline.utils.loaderutils.preprocessing) change_input_index_types() (in module pipeline.utils.modelutils.export) check_and_discard() (in module pipeline.utils.modelutils.basemodel) check_onnx_integrity() (in module pipeline.utils.modelutils.export) collect_test_samples() (in module pipeline.utils.commonutils.ctests) column_labels (in module pipeline.utils.plotutils.plotconfig) column_ranges (in module pipeline.utils.plotutils.plotconfig) column_to_computation_fct (in module pipeline.Processing.compute) column_to_required_columns (in module pipeline.Processing.compute) combine_run_event_into_event_id() (in module pipeline.utils.loaderutils.preprocessing) common_config (pipeline.utils.commonutils.config.CommonDirs property) (pipeline.utils.commonutils.config.PipelineConfig property) common_training_validation_step() (pipeline.GNN.triplet_gnn_base.TripletGNNBase method) CommonDirs (class in pipeline.utils.commonutils.config) compute_angle_between_line_and_plane() (in module pipeline.Preprocessing.line_metrics) compute_balancing_weights() (in module pipeline.Preprocessing.balancing) compute_classification_efficiency_purity() (in module pipeline.utils.modelutils.metrics) compute_column() (in module pipeline.Processing.compute) compute_columns() (in module pipeline.Processing.compute) compute_distance_to_line() (in module pipeline.Preprocessing.line_metrics) compute_distance_to_poly() (in module pipeline.Preprocessing.poly_metrics) compute_distance_to_z_axis() (in module pipeline.Preprocessing.line_metrics) compute_distances_between_two_lines() (in module pipeline.Preprocessing.line_metrics) compute_edge_labels_from_pid_only() (in module pipeline.utils.graphutils.edgeutils) compute_efficiency_purity() (in module pipeline.utils.modelutils.metrics) compute_n_particles_per_hit() (in module pipeline.Preprocessing.process_custom) compute_n_unique_planes() (in module pipeline.Preprocessing.process_custom) compute_normalised_loss() (pipeline.GNN.triplet_gnn_base.TripletGNNBase method) compute_particle_line_metrics() (in module pipeline.Preprocessing.particle_fitting_metrics) compute_particle_line_metrics_dataframe() (in module pipeline.Preprocessing.particle_fitting_metrics) compute_particle_line_metrics_events_impl() (in module pipeline.Preprocessing.particle_fitting_metrics) compute_particle_metric() (in module pipeline.Preprocessing.particle_fitting_metrics) compute_performance_metrics() (pipeline.utils.modelutils.exploration.ParamExplorer method) compute_quadratic_coeff() (in module pipeline.Preprocessing.poly_metrics) compute_triplet_truths() (in module pipeline.utils.graphutils.tripletbuilding) compute_xz_angle() (in module pipeline.Preprocessing.line_metrics) compute_yz_angle() (in module pipeline.Preprocessing.line_metrics) configure_logger() (in module pipeline.utils.scriptutils) (in module pipeline.utils.scriptutils.loghandler) configure_matplotlib() (in module pipeline.utils.plotutils.plotconfig) configure_optimizers() (pipeline.utils.modelutils.basemodel.ModelBase method) connect_elbows() (in module pipeline.TrackBuilding.triplets2tracks) connected_components() (in module pipeline.TrackBuilding.components) connected_edges_to_connected_hits() (in module pipeline.TrackBuilding.triplets) construct_downstream() (pipeline.Embedding.build_embedding.EmbeddingInferenceBuilder method) (pipeline.GNN.perfect_gnn.PerfectInferenceBuilder method) (pipeline.GNN.perfect_gnn.PerfectTripletInferenceBuilder method) (pipeline.TrackBuilding.builder.EdgeTrackBuilder method) (pipeline.TrackBuilding.builder.TripletTrackBuilder method) (pipeline.TrackBuilding.perfect_trackbuilding.PerfectTrackBuildingBuilder method) (pipeline.utils.modelutils.build.BuilderBase method) convert_model_to_fp16() (in module pipeline.utils.modelutils.export) count_occurences() (in module pipeline.utils.tools.tarray) cure_max_node_idx() (in module pipeline.TrackBuilding.components) cut_long_tracks() (in module pipeline.Preprocessing.process_custom) cut_long_tracks_impl() (in module pipeline.Preprocessing.hit_filtering) D data_experiment_dir (pipeline.utils.commonutils.config.PipelineConfig property) default_old_training_for_rta_presentation() (in module pipeline.Preprocessing.process_custom) default_step (pipeline.Embedding.embedding_validation.EmbeddingDistanceMaxExplorer property) (pipeline.GNN.gnn_validation.GNNScoreCutExplorer property) (pipeline.utils.modelutils.exploration.ParamExplorer property) delete_directory() (in module pipeline.utils.tools.tfiles) detector (pipeline.utils.commonutils.config.PipelineConfig property) detectors (pipeline.utils.commonutils.config.CommonDirs property) dict() (pipeline.utils.commonutils.config.PipelineConfig method) dir_path (pipeline.utils.commonutils.config.PipelineConfig property) dump_if_enough_hits() (in module pipeline.Preprocessing.preprocessing) E edge_checkpointing (pipeline.GNN.triplet_gnn_base.TripletGNNBase property) edge_features_as_slope() (in module pipeline.Embedding.process_custom) EdgeBasedGNN (class in pipeline.GNN.models.edge_based_gnn) edgedir (pipeline.Embedding.embedding_base.EmbeddingBase property) edges_at_least_3_hits() (in module pipeline.Embedding.process_custom) edges_at_least_3_planes() (in module pipeline.Embedding.process_custom) EdgeTrackBuilder (class in pipeline.TrackBuilding.builder) EmbeddingBase (class in pipeline.Embedding.embedding_base) EmbeddingDistanceMaxExplorer (class in pipeline.Embedding.embedding_validation) EmbeddingInferenceBuilder (class in pipeline.Embedding.build_embedding) EmbeddingLazyDataSet (class in pipeline.Embedding.embedding_base) encoding_step() (pipeline.GNN.models.triplet_interaction_gnn.TripletInteractionGNN method) enough_true_hits() (in module pipeline.Preprocessing.preprocessing) eval_polynomial() (in module pipeline.Preprocessing.poly_metrics) evaluate_embedding_performance() (in module pipeline.Embedding.embedding_validation) evaluate_embedding_performances_given_squared_distance_max_k_max() (in module pipeline.Embedding.embedding_validation) everything_but_electrons() (in module pipeline.Preprocessing.process_custom) everything_but_long_electrons() (in module pipeline.Preprocessing.process_custom) experiment_name (pipeline.utils.commonutils.config.PipelineConfig property) F feature_indices (pipeline.utils.modelutils.basemodel.ModelBase property) feature_means (pipeline.utils.modelutils.basemodel.ModelBase property) feature_names (pipeline.utils.modelutils.basemodel.ModelBase property) feature_scales (pipeline.utils.modelutils.basemodel.ModelBase property) feature_to_compute_fct (in module pipeline.utils.modelutils.basemodel) fetch_dataset() (pipeline.Embedding.embedding_base.EmbeddingLazyDataSet method) (pipeline.GNN.triplet_gnn_base.TripletGNNLazyDataset method) (pipeline.utils.loaderutils.dataiterator.LazyDatasetBase method) fetch_datasets() (pipeline.utils.modelutils.basemodel.ModelBase method) fetch_partition() (pipeline.utils.modelutils.basemodel.ModelBase method) filter_batch() (pipeline.utils.modelutils.build.BuilderBase method) filter_edges() (pipeline.GNN.triplet_gnn_base.TripletGNNBase method) filter_single_edges() (in module pipeline.TrackBuilding.triplets2tracks) fit_line() (in module pipeline.Preprocessing.line_metrics) fit_poly() (in module pipeline.Preprocessing.poly_metrics) forked_track_links_to_tracks() (in module pipeline.TrackBuilding.triplets) forward() (pipeline.Embedding.models.layerless_embedding.LayerlessEmbedding method) (pipeline.GNN.triplet_gnn_base.TripletGNNBase method) (pipeline.utils.modelutils.basemodel.ModelONNXExport method) (pipeline.utils.modelutils.export.TRTScatterAddOp static method) forward_edges() (pipeline.GNN.models.edge_based_gnn.EdgeBasedGNN method) (pipeline.GNN.models.triplet_interaction_gnn.TripletInteractionGNN method) (pipeline.GNN.triplet_gnn_base.TripletGNNBase method) forward_triplets() (pipeline.GNN.models.edge_based_gnn.EdgeBasedGNN method) (pipeline.GNN.models.triplet_interaction_gnn.TripletInteractionGNN method) (pipeline.GNN.triplet_gnn_base.TripletGNNBase method) from_df_edges_to_df_triplets() (in module pipeline.utils.graphutils.tripletbuilding) from_edge_index_to_triplet_indices() (in module pipeline.utils.graphutils.tripletbuilding) from_triplet_index_to_triplet_truth() (in module pipeline.utils.graphutils.tripletbuilding) G get_auto_output_dir() (in module pipeline.utils.plotutils.performance_mpl) get_available_test_dataset_names() (in module pipeline.utils.commonutils.ctests) get_batches() (in module pipeline.utils.modelutils.batches) get_coordinate_names() (in module pipeline.utils.commonutils.cdetector) get_default_squared_distance_max() (in module pipeline.Embedding.embedding_validation) get_detector_from_experiment_name() (in module pipeline.utils.commonutils.config) get_detector_from_pipeline_config() (in module pipeline.utils.commonutils.config) get_df_edges() (in module pipeline.utils.graphutils.batch2df) get_df_edges_from_batch_only() (in module pipeline.GNN.triplet_gnn_base) get_df_edges_from_edge_index() (in module pipeline.utils.graphutils.batch2df) get_df_hits() (in module pipeline.utils.graphutils.batch2df) get_df_hits_particles() (in module pipeline.utils.graphutils.batch2df) get_df_hits_particles_from_particle_id_hit_idx() (in module pipeline.utils.graphutils.batch2df) get_df_triplets_from_triplet_index() (in module pipeline.utils.graphutils.batch2df) get_edges_from_sorted_impl() (in module pipeline.Processing.planewise_edges) (in module pipeline.Processing.sortedwise_edges) get_example_data() (in module pipeline.Embedding.embedding_base) get_features() (pipeline.utils.modelutils.basemodel.ModelBase method) get_figs_axes_on_grid() (in module pipeline.utils.plotutils.plotools) get_filenames_from_detector() (pipeline.utils.commonutils.config.CommonDirs method) get_filtered_triplet_indices() (in module pipeline.TrackBuilding.triplets) get_group_indices() (in module pipeline.utils.tools.tgroupby) get_group_indices_from_group_lengths() (in module pipeline.utils.tools.tgroupby) get_groupby_indices() (in module pipeline.utils.graphutils.torchutils) get_hnm_pairs() (pipeline.Embedding.embedding_base.EmbeddingBase method) get_indirs() (in module pipeline.Preprocessing.inputloader) get_input_features() (in module pipeline.utils.commonutils.cfeatures) get_input_paths() (in module pipeline.utils.loaderutils.pathandling) get_last_artifact() (in module pipeline.utils.modelutils.checkpoint_utils) get_last_version_dir() (in module pipeline.utils.modelutils.checkpoint_utils) get_last_version_dir_from_config() (in module pipeline.utils.modelutils.checkpoint_utils) get_lazy_dataset() (pipeline.Embedding.embedding_base.EmbeddingBase method) (pipeline.GNN.triplet_gnn_base.TripletGNNBase method) (pipeline.utils.modelutils.basemodel.ModelBase method) get_lazy_dataset_partition() (pipeline.Embedding.embedding_base.EmbeddingBase method) (pipeline.GNN.triplet_gnn_base.TripletGNNBase method) (pipeline.utils.modelutils.basemodel.ModelBase method) get_loss() (pipeline.Embedding.embedding_base.EmbeddingBase method) get_model() (in module pipeline) (in module pipeline.Embedding.models) (in module pipeline.GNN.models) get_model_from_checkpoint() (pipeline.utils.modelutils.basemodel.ModelBase class method) get_modulewise_edges() (in module pipeline.Processing.modulewise_edges) get_n_features() (pipeline.utils.modelutils.basemodel.ModelBase method) get_normalised_features() (in module pipeline.Processing.processing) get_number_input_features() (in module pipeline.utils.commonutils.cfeatures) get_numpy_or_cupy() (in module pipeline.utils.tools.tarray) get_output_dir() (pipeline.utils.modelutils.exploration.ParamExplorer method) get_pandas_or_cudf() (in module pipeline.utils.tools.tarray) get_parsed_args() (in module scripts.train_model) get_performance_directory_experiment() (in module pipeline.utils.commonutils.config) get_performance_from_tracks() (pipeline.utils.modelutils.exploration.ParamExplorer method) get_pipeline_config_path() (in module pipeline.utils.commonutils.config) get_planewise_custom_edges() (in module pipeline.Processing.planewise_edges) get_planewise_edges() (in module pipeline.Processing.planewise_edges) get_planewise_edges_impl() (in module pipeline.Processing.planewise_edges) get_preprocessed_test_dataset_dir() (in module pipeline.utils.commonutils.ctests) get_query_points() (pipeline.Embedding.embedding_base.EmbeddingBase method) get_random_pairs() (pipeline.Embedding.embedding_base.EmbeddingBase method) get_random_pairs_plane_by_plane() (in module pipeline.utils.graphutils.edgebuilding) get_required_test_dataset_names() (in module pipeline.utils.commonutils.ctests) get_sortedwise_edges() (in module pipeline.Processing.sortedwise_edges) get_sortedwise_edges_impl() (in module pipeline.Processing.sortedwise_edges) get_squared_distance_max_from_config() (in module pipeline.Embedding.build_embedding) get_squared_distances() (pipeline.Embedding.embedding_base.EmbeddingBase method) get_subnetwork_inputs() (pipeline.utils.modelutils.basemodel.ModelBase method) get_subnetwork_outputs() (pipeline.utils.modelutils.basemodel.ModelBase method) get_test_batch_dir() (in module pipeline.utils.commonutils.ctests) (pipeline.utils.commonutils.config.PipelineConfig method) get_test_batch_paths() (in module pipeline.utils.commonutils.ctests) get_test_config_for_preprocessing() (in module pipeline.utils.commonutils.ctests) get_tracks() (pipeline.Embedding.embedding_validation.EmbeddingDistanceMaxExplorer method) (pipeline.GNN.gnn_validation.GNNScoreCutExplorer method) (pipeline.GNN.gnn_validation.TripletGNNScoreCutExplorer method) (pipeline.utils.modelutils.exploration.ParamExplorer method) get_tracks_from_batch() (in module pipeline.utils.loaderutils.tracks) get_tracks_input_directory() (in module pipeline.utils.loaderutils.tracks) get_training_edges() (pipeline.Embedding.embedding_base.EmbeddingBase method) get_training_metrics() (in module pipeline.utils.modelutils.checkpoint_utils) (in module pipeline.utils.scriptutils.convenience_utils) get_triplet_truths_from_tensors() (in module pipeline.utils.graphutils.tripletbuilding) get_truncated_paths() (in module pipeline.Preprocessing.preprocessing_paths) get_truncated_paths_for_partition() (in module pipeline.Preprocessing.preprocessing_paths) get_truth() (pipeline.Embedding.embedding_base.EmbeddingBase method) get_truth_cudf() (in module pipeline.utils.graphutils.truths) get_truths_exatrkx() (in module pipeline.utils.graphutils.truths) get_truths_pytorch() (in module pipeline.utils.graphutils.truths) get_unnormalised_features() (in module pipeline.utils.commonutils.cfeatures) get_use_cuda_from_dataframe() (in module pipeline.utils.tools.tarray) get_value() (pipeline.utils.tools.tstr.MyFormatter method) GNNScoreCutExplorer (class in pipeline.GNN.gnn_validation) H headline() (in module pipeline.utils.scriptutils) (in module pipeline.utils.scriptutils.loghandler) hide_repetitive_labels_in_grid() (in module pipeline.utils.plotutils.plotools) I infer() (pipeline.utils.modelutils.build.BuilderBase method) infer_one_step() (pipeline.utils.modelutils.build.BuilderBase method) inference() (pipeline.Embedding.embedding_base.EmbeddingBase method) (pipeline.GNN.triplet_gnn_base.TripletGNNBase method) InOutFunction (class in pipeline.utils.commonutils.crun) input_kwargs (pipeline.Embedding.embedding_base.EmbeddingBase property) (pipeline.GNN.models.edge_based_gnn.EdgeBasedGNN property) (pipeline.GNN.models.triplet_interaction_gnn.TripletInteractionGNN property) (pipeline.GNN.triplet_gnn_base.TripletGNNBase property) (pipeline.utils.modelutils.basemodel.ModelBase property) input_to_dynamic_axes (pipeline.Embedding.embedding_base.EmbeddingBase property) (pipeline.GNN.models.edge_based_gnn.EdgeBasedGNN property) (pipeline.GNN.models.triplet_interaction_gnn.TripletInteractionGNN property) (pipeline.GNN.triplet_gnn_base.TripletGNNBase property) (pipeline.utils.modelutils.basemodel.ModelBase property) instantiate_model_for_training() (in module pipeline) is_directory_not_empty() (in module pipeline.utils.tools.tfiles) L last_plane (pipeline.Embedding.embedding_base.EmbeddingBase property) LayerlessEmbedding (class in pipeline.Embedding.models.layerless_embedding) lazy (pipeline.utils.modelutils.basemodel.ModelBase property) LazyDatasetBase (class in pipeline.utils.loaderutils.dataiterator) less_than_3_hits_on_same_plane() (in module pipeline.Preprocessing.process_custom) load_batch() (pipeline.GNN.perfect_gnn.PerfectTripletInferenceBuilder method) (pipeline.TrackBuilding.builder.TripletTrackBuilder method) (pipeline.TrackBuilding.perfect_trackbuilding.PerfectTrackBuildingBuilder method) (pipeline.utils.modelutils.build.BuilderBase method) (pipeline.utils.modelutils.build.ModelBuilderBase method) load_config() (in module pipeline.utils.commonutils.config) load_dataframes() (in module pipeline.utils.loaderutils.preprocessing) load_dict() (in module pipeline.utils.commonutils.config) load_partition() (pipeline.utils.modelutils.basemodel.ModelBase method) load_preprocessed_dataframes() (in module pipeline.utils.loaderutils.preprocessing) (pipeline.utils.modelutils.exploration.ParamExplorer method) load_preprocessing_test_config() (in module pipeline.utils.commonutils.ctests) load_testset_from_directory() (pipeline.utils.modelutils.basemodel.ModelBase method) load_tracks() (in module pipeline.utils.loaderutils.tracks) load_tracks_event() (in module pipeline.utils.loaderutils.tracks) load_tracks_preprocessed_dataframes_given_partition() (in module pipeline.utils.loaderutils.tracks) load_trained_model() (in module pipeline) load_trainset_split_indices() (pipeline.utils.modelutils.basemodel.ModelBase method) log_metrics_gen() (pipeline.GNN.triplet_gnn_base.TripletGNNBase method) loss (pipeline.GNN.triplet_gnn_base.TripletGNNBase property) M make_mlp() (in module pipeline.utils.modelutils.mlp) mask_long_into_small_tracks() (in module pipeline.Preprocessing.hit_filtering) merge_df_hits_particles_to_edges() (in module pipeline.utils.graphutils.batch2df) message_step() (pipeline.GNN.models.edge_based_gnn.EdgeBasedGNN method) (pipeline.GNN.models.triplet_interaction_gnn.TripletInteractionGNN method) model (pipeline.utils.modelutils.basemodel.ModelONNXExport attribute) ModelBase (class in pipeline.utils.modelutils.basemodel) ModelBuilderBase (class in pipeline.utils.modelutils.build) ModelONNXExport (class in pipeline.utils.modelutils.basemodel) module pipeline pipeline.Embedding pipeline.Embedding.build_embedding pipeline.Embedding.embedding_base pipeline.Embedding.embedding_plots pipeline.Embedding.embedding_validation pipeline.Embedding.models pipeline.Embedding.models.layerless_embedding pipeline.Embedding.process_custom pipeline.Evaluation pipeline.Evaluation.matching pipeline.Evaluation.plotting pipeline.Evaluation.reporting pipeline.GNN pipeline.GNN.gnn_plots pipeline.GNN.gnn_validation pipeline.GNN.models pipeline.GNN.models.edge_based_gnn pipeline.GNN.models.triplet_interaction_gnn pipeline.GNN.perfect_gnn pipeline.GNN.triplet_gnn_base pipeline.Preprocessing pipeline.Preprocessing.balancing pipeline.Preprocessing.hit_filtering pipeline.Preprocessing.inputloader pipeline.Preprocessing.line_metrics pipeline.Preprocessing.particle_fitting_metrics pipeline.Preprocessing.poly_metrics pipeline.Preprocessing.preprocessing pipeline.Preprocessing.preprocessing_paths pipeline.Preprocessing.process_custom pipeline.Preprocessing.run_preprocessing pipeline.Processing pipeline.Processing.compute pipeline.Processing.modulewise_edges pipeline.Processing.planewise_edges pipeline.Processing.processing pipeline.Processing.run_processing pipeline.Processing.sortedwise_edges pipeline.Processing.splitting pipeline.TrackBuilding pipeline.TrackBuilding.builder pipeline.TrackBuilding.components pipeline.TrackBuilding.edges2tracks pipeline.TrackBuilding.perfect_trackbuilding pipeline.TrackBuilding.triplets pipeline.TrackBuilding.triplets2tracks pipeline.utils pipeline.utils.commonutils pipeline.utils.commonutils.cdetector pipeline.utils.commonutils.cfeatures pipeline.utils.commonutils.config pipeline.utils.commonutils.crun pipeline.utils.commonutils.ctests pipeline.utils.graphutils pipeline.utils.graphutils.batch2df pipeline.utils.graphutils.edgebuilding pipeline.utils.graphutils.edgeutils pipeline.utils.graphutils.knn pipeline.utils.graphutils.torchutils pipeline.utils.graphutils.tripletbuilding pipeline.utils.graphutils.truths pipeline.utils.loaderutils pipeline.utils.loaderutils.dataiterator pipeline.utils.loaderutils.pathandling pipeline.utils.loaderutils.preprocessing pipeline.utils.loaderutils.tracks pipeline.utils.modelutils pipeline.utils.modelutils.basemodel pipeline.utils.modelutils.batches pipeline.utils.modelutils.build pipeline.utils.modelutils.checkpoint_utils pipeline.utils.modelutils.exploration pipeline.utils.modelutils.export pipeline.utils.modelutils.metrics pipeline.utils.modelutils.mlp pipeline.utils.plotutils pipeline.utils.plotutils.performance_mpl pipeline.utils.plotutils.plotconfig pipeline.utils.plotutils.plotools pipeline.utils.plotutils.tracks pipeline.utils.scriptutils pipeline.utils.scriptutils.convenience_utils pipeline.utils.scriptutils.loghandler pipeline.utils.scriptutils.parser pipeline.utils.tools pipeline.utils.tools.tarray pipeline.utils.tools.tfiles pipeline.utils.tools.tgroupby pipeline.utils.tools.tstr scripts scripts.preprocess_test_sample scripts.process_test_sample scripts.train_model MyFormatter (class in pipeline.utils.tools.tstr) N n_graph_iters (pipeline.GNN.models.triplet_interaction_gnn.TripletInteractionGNN property) n_hiddens (pipeline.Embedding.models.layerless_embedding.LayerlessEmbedding property) (pipeline.GNN.triplet_gnn_base.TripletGNNBase property) n_layers (pipeline.Embedding.models.layerless_embedding.LayerlessEmbedding property) n_planes (pipeline.Embedding.embedding_base.EmbeddingBase property) n_total_planes (pipeline.Embedding.embedding_base.EmbeddingBase property) n_trainable_params (pipeline.utils.modelutils.basemodel.ModelBase property) O on_step (pipeline.utils.modelutils.basemodel.ModelBase property) only_e (pipeline.GNN.models.triplet_interaction_gnn.TripletInteractionGNN property) only_keep_hits_on_particles() (in module pipeline.Preprocessing.process_custom) only_long_electrons() (in module pipeline.Preprocessing.process_custom) optimizer_step() (pipeline.utils.modelutils.basemodel.ModelBase method) output_step() (pipeline.GNN.models.triplet_interaction_gnn.TripletInteractionGNN method) P pad_on_top() (in module pipeline.utils.plotutils.plotools) ParamExplorer (class in pipeline.utils.modelutils.exploration) parse_args() (in module pipeline.utils.scriptutils) (in module pipeline.utils.scriptutils.parser) partial_format() (in module pipeline.utils.tools.tstr) partition_to_color (in module pipeline.utils.plotutils.plotconfig) partition_to_label (in module pipeline.utils.plotutils.plotconfig) PerfectInferenceBuilder (class in pipeline.GNN.perfect_gnn) PerfectTrackBuildingBuilder (class in pipeline.TrackBuilding.perfect_trackbuilding) PerfectTripletInferenceBuilder (class in pipeline.GNN.perfect_gnn) perform_matching() (in module pipeline.Evaluation.matching) performance_dir (pipeline.utils.commonutils.config.PipelineConfig property) pipeline module pipeline.Embedding module pipeline.Embedding.build_embedding module pipeline.Embedding.embedding_base module pipeline.Embedding.embedding_plots module pipeline.Embedding.embedding_validation module pipeline.Embedding.models module pipeline.Embedding.models.layerless_embedding module pipeline.Embedding.process_custom module pipeline.Evaluation module pipeline.Evaluation.matching module pipeline.Evaluation.plotting module pipeline.Evaluation.reporting module pipeline.GNN module pipeline.GNN.gnn_plots module pipeline.GNN.gnn_validation module pipeline.GNN.models module pipeline.GNN.models.edge_based_gnn module pipeline.GNN.models.triplet_interaction_gnn module pipeline.GNN.perfect_gnn module pipeline.GNN.triplet_gnn_base module pipeline.Preprocessing module pipeline.Preprocessing.balancing module pipeline.Preprocessing.hit_filtering module pipeline.Preprocessing.inputloader module pipeline.Preprocessing.line_metrics module pipeline.Preprocessing.particle_fitting_metrics module pipeline.Preprocessing.poly_metrics module pipeline.Preprocessing.preprocessing module pipeline.Preprocessing.preprocessing_paths module pipeline.Preprocessing.process_custom module pipeline.Preprocessing.run_preprocessing module pipeline.Processing module pipeline.Processing.compute module pipeline.Processing.modulewise_edges module pipeline.Processing.planewise_edges module pipeline.Processing.processing module pipeline.Processing.run_processing module pipeline.Processing.sortedwise_edges module pipeline.Processing.splitting module pipeline.TrackBuilding module pipeline.TrackBuilding.builder module pipeline.TrackBuilding.components module pipeline.TrackBuilding.edges2tracks module pipeline.TrackBuilding.perfect_trackbuilding module pipeline.TrackBuilding.triplets module pipeline.TrackBuilding.triplets2tracks module pipeline.utils module pipeline.utils.commonutils module pipeline.utils.commonutils.cdetector module pipeline.utils.commonutils.cfeatures module pipeline.utils.commonutils.config module pipeline.utils.commonutils.crun module pipeline.utils.commonutils.ctests module pipeline.utils.graphutils module pipeline.utils.graphutils.batch2df module pipeline.utils.graphutils.edgebuilding module pipeline.utils.graphutils.edgeutils module pipeline.utils.graphutils.knn module pipeline.utils.graphutils.torchutils module pipeline.utils.graphutils.tripletbuilding module pipeline.utils.graphutils.truths module pipeline.utils.loaderutils module pipeline.utils.loaderutils.dataiterator module pipeline.utils.loaderutils.pathandling module pipeline.utils.loaderutils.preprocessing module pipeline.utils.loaderutils.tracks module pipeline.utils.modelutils module pipeline.utils.modelutils.basemodel module pipeline.utils.modelutils.batches module pipeline.utils.modelutils.build module pipeline.utils.modelutils.checkpoint_utils module pipeline.utils.modelutils.exploration module pipeline.utils.modelutils.export module pipeline.utils.modelutils.metrics module pipeline.utils.modelutils.mlp module pipeline.utils.plotutils module pipeline.utils.plotutils.performance_mpl module pipeline.utils.plotutils.plotconfig module pipeline.utils.plotutils.plotools module pipeline.utils.plotutils.tracks module pipeline.utils.scriptutils module pipeline.utils.scriptutils.convenience_utils module pipeline.utils.scriptutils.loghandler module pipeline.utils.scriptutils.parser module pipeline.utils.tools module pipeline.utils.tools.tarray module pipeline.utils.tools.tfiles module pipeline.utils.tools.tgroupby module pipeline.utils.tools.tstr module PipelineConfig (class in pipeline.utils.commonutils.config) plot() (pipeline.utils.modelutils.exploration.ParamExplorer method) plot_best_performances_score_cut() (in module pipeline.GNN.gnn_plots) plot_best_performances_score_cut_triplets() (in module pipeline.GNN.gnn_plots) plot_best_performances_squared_distance_max() (in module pipeline.Embedding.embedding_plots) plot_edge_performance() (in module pipeline.utils.plotutils.performance_mpl) plot_embedding_performance_given_squared_distance_max_k_max() (in module pipeline.Embedding.embedding_plots) plot_evaluation() (in module pipeline.Evaluation.plotting) plot_evaluation_categories() (in module pipeline.Evaluation.plotting) plot_histograms_trackevaluator() (in module pipeline.Evaluation.plotting) plot_loss() (in module pipeline.utils.plotutils.performance_mpl) plot_metric_epochs() (in module pipeline.utils.plotutils.performance_mpl) plot_tracks() (in module pipeline.utils.plotutils.tracks) plot_triplet_performance() (in module pipeline.utils.plotutils.performance_mpl) prepare_event() (in module pipeline.Processing.processing) preprocess() (in module pipeline.Preprocessing.preprocessing) process_one_step() (pipeline.utils.modelutils.build.BuilderBase method) Q query_planes (pipeline.Embedding.embedding_base.EmbeddingBase property) R randomly_split_list() (in module pipeline.Processing.splitting) reconstructible_scifi() (in module pipeline.Preprocessing.process_custom) recursive (pipeline.GNN.models.triplet_interaction_gnn.TripletInteractionGNN property) remove_curved_particles() (in module pipeline.Preprocessing.process_custom) remove_duplicate_edges() (in module pipeline.utils.graphutils.edgeutils) remove_edges_in_same_plane() (in module pipeline.Embedding.process_custom) remove_particle_not_poly_enough() (in module pipeline.Preprocessing.process_custom) remove_particles_too_scattered_on_plane() (in module pipeline.Preprocessing.process_custom) remove_planes() (pipeline.Embedding.embedding_base.EmbeddingBase method) report_evaluation() (in module pipeline.Evaluation.reporting) repository (pipeline.utils.commonutils.config.CommonDirs property) required_test_dataset_names (pipeline.utils.commonutils.config.PipelineConfig property) resolve_relative_path() (in module pipeline.utils.commonutils.config) run_for_different_partitions() (in module pipeline.utils.commonutils.crun) run_inference() (pipeline.GNN.gnn_validation.GNNScoreCutExplorer method) (pipeline.GNN.gnn_validation.TripletGNNScoreCutExplorer method) (pipeline.utils.modelutils.exploration.ParamExplorer method) run_preprocessing() (in module pipeline.Preprocessing.run_preprocessing) run_preprocessing_test_dataset() (in module pipeline.Preprocessing.run_preprocessing) run_processing_from_config() (in module pipeline.Processing.run_processing) run_processing_in_parallel() (in module pipeline.Processing.run_processing) run_processing_test_dataset() (in module pipeline.Processing.run_processing) S save_downstream() (pipeline.utils.modelutils.build.BuilderBase method) save_fig() (in module pipeline.utils.plotutils.plotools) scatter_add() (pipeline.GNN.models.triplet_interaction_gnn.TripletInteractionGNN method) scatter_max() (pipeline.GNN.models.triplet_interaction_gnn.TripletInteractionGNN method) scatter_reduce() (in module pipeline.utils.graphutils.torchutils) scripts module scripts.preprocess_test_sample module scripts.process_test_sample module scripts.train_model module select_subset() (in module pipeline.utils.modelutils.batches) SelectionFunction (class in pipeline.Preprocessing.process_custom) series_to_array() (in module pipeline.utils.tools.tarray) series_to_tensor() (in module pipeline.utils.tools.tarray) set_same_y_lim_for_all_axes() (in module pipeline.utils.plotutils.plotools) setup() (pipeline.utils.modelutils.basemodel.ModelBase method) shared_evaluation() (pipeline.GNN.triplet_gnn_base.TripletGNNBase method) sort_edge_nodes() (in module pipeline.utils.graphutils.edgeutils) split_articulations() (in module pipeline.TrackBuilding.triplets2tracks) split_triplet_indices_two_connected_components() (in module pipeline.TrackBuilding.triplets2tracks) steps (pipeline.utils.commonutils.config.PipelineConfig property) subnetwork (pipeline.utils.modelutils.basemodel.ModelONNXExport attribute) subnetwork_groups (pipeline.GNN.models.edge_based_gnn.EdgeBasedGNN property) (pipeline.GNN.models.triplet_interaction_gnn.TripletInteractionGNN property) (pipeline.utils.modelutils.basemodel.ModelBase property) subnetwork_to_outputs (pipeline.Embedding.embedding_base.EmbeddingBase property) (pipeline.GNN.models.edge_based_gnn.EdgeBasedGNN property) (pipeline.GNN.models.triplet_interaction_gnn.TripletInteractionGNN property) (pipeline.GNN.triplet_gnn_base.TripletGNNBase property) (pipeline.utils.modelutils.basemodel.ModelBase property) subnetworks (pipeline.GNN.models.edge_based_gnn.EdgeBasedGNN property) (pipeline.utils.modelutils.basemodel.ModelBase property) symbolic() (pipeline.utils.modelutils.export.TRTScatterAddOp static method) T tensor_to_array() (in module pipeline.utils.tools.tarray) tensor_to_cupy_array() (in module pipeline.utils.tools.tarray) test_config_path (pipeline.utils.commonutils.config.CommonDirs property) test_dataloader() (pipeline.utils.modelutils.basemodel.ModelBase method) test_step() (pipeline.GNN.triplet_gnn_base.TripletGNNBase method) testset (pipeline.utils.modelutils.basemodel.ModelBase property) to_dataframe() (in module pipeline.utils.tools.tarray) to_onnx() (pipeline.Embedding.embedding_base.EmbeddingBase method) (pipeline.GNN.models.triplet_interaction_gnn.TripletInteractionGNN method) (pipeline.GNN.triplet_gnn_base.TripletGNNBase method) (pipeline.utils.modelutils.basemodel.ModelBase method) track_weighting_selection() (in module pipeline.Preprocessing.process_custom) train_dataloader() (pipeline.utils.modelutils.basemodel.ModelBase method) train_model() (in module scripts.train_model) training_step() (pipeline.Embedding.embedding_base.EmbeddingBase method) (pipeline.GNN.triplet_gnn_base.TripletGNNBase method) training_validation_step() (pipeline.Embedding.embedding_base.EmbeddingBase method) trainset (pipeline.utils.modelutils.basemodel.ModelBase property) triplet_checkpointing (pipeline.GNN.triplet_gnn_base.TripletGNNBase property) triplet_output_step() (pipeline.GNN.triplet_gnn_base.TripletGNNBase method) triplet_output_step_articulation() (pipeline.GNN.models.edge_based_gnn.EdgeBasedGNN method) (pipeline.GNN.models.triplet_interaction_gnn.TripletInteractionGNN method) (pipeline.GNN.triplet_gnn_base.TripletGNNBase method) triplet_output_step_elbow_left() (pipeline.GNN.models.edge_based_gnn.EdgeBasedGNN method) (pipeline.GNN.models.triplet_interaction_gnn.TripletInteractionGNN method) (pipeline.GNN.triplet_gnn_base.TripletGNNBase method) triplet_output_step_elbow_right() (pipeline.GNN.models.edge_based_gnn.EdgeBasedGNN method) (pipeline.GNN.models.triplet_interaction_gnn.TripletInteractionGNN method) (pipeline.GNN.triplet_gnn_base.TripletGNNBase method) TripletGNNBase (class in pipeline.GNN.triplet_gnn_base) TripletGNNLazyDataset (class in pipeline.GNN.triplet_gnn_base) TripletGNNScoreCutExplorer (class in pipeline.GNN.gnn_validation) TripletInteractionGNN (class in pipeline.GNN.models.triplet_interaction_gnn) triplets_first_selection() (in module pipeline.Preprocessing.process_custom) TripletTrackBuilder (class in pipeline.TrackBuilding.builder) TRTScatterAddOp (class in pipeline.utils.modelutils.export) U update_dataframe_connected_edges() (in module pipeline.TrackBuilding.triplets) update_dataframe_track_links() (in module pipeline.TrackBuilding.triplets) V val_dataloader() (pipeline.utils.modelutils.basemodel.ModelBase method) validate_edges() (pipeline.Embedding.embedding_base.EmbeddingBase method) validation_step() (pipeline.Embedding.embedding_base.EmbeddingBase method) (pipeline.GNN.triplet_gnn_base.TripletGNNBase method) valset (pipeline.utils.modelutils.basemodel.ModelBase property) W weights_inversely_proportional_to_nhits() (in module pipeline.Embedding.process_custom) with_triplets (pipeline.GNN.triplet_gnn_base.TripletGNNBase property)
